STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr44WD repeat domain 44. (910 aa)    
Predicted Functional Partners:
clec16a
C-type lectin domain containing 16A.
      
 0.566
aqr
Aquarius intron-binding spliceosomal factor.
      
 0.566
pank4
Pantothenate kinase.
      
 0.515
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
      
 0.513
rabgef1
Uncharacterized protein.
   
  
 0.458
LOC110952718
Uncharacterized protein.
   
  
 0.458
LOC110960074
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
  
 0.458
kansl2
KAT8 regulatory NSL complex subunit 2.
      
 0.457
LOC110969361
VAMP (vesicle-associated membrane protein)-associated protein B and C.
   
 
 0.450
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
   
 
 0.450
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.