Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nhlrc1RING-type domain-containing protein. (410 aa)    
Predicted Functional Partners:
epm2a
EPM2A glucan phosphatase, laforin.
    
 0.997
adam23
ADAM metallopeptidase domain 23.
      
 0.838
gys2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 0.824
gys1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 0.824
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
   
 
 0.796
LOC110949022
STIP1 homology and U-Box containing protein 1.
    
 
 0.792
dhx57
DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57.
    
 0.709
STUB1
STIP1 homology and U-box containing protein 1.
    
 
 0.690
FSD2
Fibronectin type III and SPRY domain containing 2.
      
 0.682
bspry
B30.2/SPRY domain-containing protein.
      
 0.677
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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