Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970093MARVEL domain-containing protein. (189 aa)    
Predicted Functional Partners:
LOC110948715
CKLF-like MARVEL transmembrane domain containing 8b.
      
 0.873
LOC110958732
Uncharacterized protein.
    
 
 0.868
cmtm7
MARVEL domain-containing protein.
      
 0.859
LOC110955785
MARVEL domain-containing protein.
      
 0.836
cmtm4
CKLF-like MARVEL transmembrane domain containing 4.
    
 
 0.776
invs
Inversin.
     
 0.739
LOC110956142
CKLF-like MARVEL transmembrane domain containing 3.
   
  
 0.694
nelfcd
Negative elongation factor complex member C/D.
      
 0.654
ENSAPOP00000012584
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
      
 0.563
LOC110956832
Tetraspanin.
      
 0.563
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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