STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000004102Uncharacterized protein. (154 aa)    
Predicted Functional Partners:
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.854
anapc1
Anaphase promoting complex subunit 1.
    
 0.802
ppp4r3a
SMEK homolog 1, suppressor of mek1 (Dictyostelium).
   
 0.792
ppp4r3b
Protein phosphatase 4, regulatory subunit 3B.
   
 0.792
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.792
LOC110956346
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.790
LOC110957972
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.790
LOC110958832
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.790
LOC110951083
WD_REPEATS_REGION domain-containing protein.
    
 0.783
LOC110960657
WD repeat domain 82.
    
 0.783
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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