LOC110968261 protein (Acanthochromis polyacanthus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC110968261

Double C2-like domains, alpha. (455 aa)

Predicted Functional Partners:

ENSAPOP00000009549

0.716

LOC110968316

0.458

LOC110952740

0.458

LOC110970237

0.458

LOC110950965

0.458

LOC110950715

0.458

LOC110969659

0.458

LOC110949433

0.450

LOC110957159

0.450

rab27a

0.450

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000009549	LOC110949433	ENSAPOP00000009549	ENSAPOP00000003622	Uncharacterized protein.	Uncharacterized protein.	0.450
ENSAPOP00000009549	LOC110950715	ENSAPOP00000009549	ENSAPOP00000034525	Uncharacterized protein.	RAB3A, member RAS oncogene family, b.	0.458
ENSAPOP00000009549	LOC110950965	ENSAPOP00000009549	ENSAPOP00000029512	Uncharacterized protein.	Uncharacterized protein.	0.458
ENSAPOP00000009549	LOC110952740	ENSAPOP00000009549	ENSAPOP00000009562	Uncharacterized protein.	RAB3D, member RAS oncogene family, b.	0.458
ENSAPOP00000009549	LOC110957159	ENSAPOP00000009549	ENSAPOP00000032554	Uncharacterized protein.	RAB27B, member RAS oncogene family.	0.450
ENSAPOP00000009549	LOC110968261	ENSAPOP00000009549	ENSAPOP00000004141	Uncharacterized protein.	Double C2-like domains, alpha.	0.716
ENSAPOP00000009549	LOC110968316	ENSAPOP00000009549	ENSAPOP00000002332	Uncharacterized protein.	RAB3C, member RAS oncogene family.	0.458
ENSAPOP00000009549	LOC110969659	ENSAPOP00000009549	ENSAPOP00000034661	Uncharacterized protein.	Uncharacterized protein.	0.458
ENSAPOP00000009549	LOC110970237	ENSAPOP00000009549	ENSAPOP00000021392	Uncharacterized protein.	RAB3B, member RAS oncogene family.	0.458
ENSAPOP00000009549	rab27a	ENSAPOP00000009549	ENSAPOP00000033687	Uncharacterized protein.	RAB27A, member RAS oncogene family.	0.450
LOC110949433	ENSAPOP00000009549	ENSAPOP00000003622	ENSAPOP00000009549	Uncharacterized protein.	Uncharacterized protein.	0.450
LOC110949433	LOC110950715	ENSAPOP00000003622	ENSAPOP00000034525	Uncharacterized protein.	RAB3A, member RAS oncogene family, b.	0.551
LOC110949433	LOC110950965	ENSAPOP00000003622	ENSAPOP00000029512	Uncharacterized protein.	Uncharacterized protein.	0.551
LOC110949433	LOC110952740	ENSAPOP00000003622	ENSAPOP00000009562	Uncharacterized protein.	RAB3D, member RAS oncogene family, b.	0.551
LOC110949433	LOC110968261	ENSAPOP00000003622	ENSAPOP00000004141	Uncharacterized protein.	Double C2-like domains, alpha.	0.450
LOC110949433	LOC110968316	ENSAPOP00000003622	ENSAPOP00000002332	Uncharacterized protein.	RAB3C, member RAS oncogene family.	0.552
LOC110949433	LOC110969659	ENSAPOP00000003622	ENSAPOP00000034661	Uncharacterized protein.	Uncharacterized protein.	0.551
LOC110949433	LOC110970237	ENSAPOP00000003622	ENSAPOP00000021392	Uncharacterized protein.	RAB3B, member RAS oncogene family.	0.552
LOC110949433	rab27a	ENSAPOP00000003622	ENSAPOP00000033687	Uncharacterized protein.	RAB27A, member RAS oncogene family.	0.553
LOC110950715	ENSAPOP00000009549	ENSAPOP00000034525	ENSAPOP00000009549	RAB3A, member RAS oncogene family, b.	Uncharacterized protein.	0.458