LOC110968261 protein (Acanthochromis polyacanthus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC110968261

Double C2-like domains, alpha. (455 aa)

Predicted Functional Partners:

ENSAPOP00000009549

0.725

LOC110949433

0.570

LOC110957159

0.570

rab27a

0.570

LOC110960308

0.542

cebpz

0.525

UBE3A

0.467

LOC110968316

0.456

LOC110952740

0.456

LOC110970237

0.456

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000009549	LOC110949433	ENSAPOP00000009549	ENSAPOP00000003622	Uncharacterized protein.	Uncharacterized protein.	0.570
ENSAPOP00000009549	LOC110952740	ENSAPOP00000009549	ENSAPOP00000009562	Uncharacterized protein.	RAB3D, member RAS oncogene family, b.	0.456
ENSAPOP00000009549	LOC110957159	ENSAPOP00000009549	ENSAPOP00000032554	Uncharacterized protein.	RAB27B, member RAS oncogene family.	0.570
ENSAPOP00000009549	LOC110968261	ENSAPOP00000009549	ENSAPOP00000004141	Uncharacterized protein.	Double C2-like domains, alpha.	0.725
ENSAPOP00000009549	LOC110968316	ENSAPOP00000009549	ENSAPOP00000002332	Uncharacterized protein.	RAB3C, member RAS oncogene family.	0.456
ENSAPOP00000009549	LOC110970237	ENSAPOP00000009549	ENSAPOP00000021392	Uncharacterized protein.	RAB3B, member RAS oncogene family.	0.474
ENSAPOP00000009549	UBE3A	ENSAPOP00000009549	ENSAPOP00000032985	Uncharacterized protein.	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.	0.467
ENSAPOP00000009549	cebpz	ENSAPOP00000009549	ENSAPOP00000026311	Uncharacterized protein.	CCAAT enhancer binding protein zeta.	0.525
ENSAPOP00000009549	rab27a	ENSAPOP00000009549	ENSAPOP00000033687	Uncharacterized protein.	RAB27A, member RAS oncogene family.	0.601
LOC110949433	ENSAPOP00000009549	ENSAPOP00000003622	ENSAPOP00000009549	Uncharacterized protein.	Uncharacterized protein.	0.570
LOC110949433	LOC110952740	ENSAPOP00000003622	ENSAPOP00000009562	Uncharacterized protein.	RAB3D, member RAS oncogene family, b.	0.698
LOC110949433	LOC110968261	ENSAPOP00000003622	ENSAPOP00000004141	Uncharacterized protein.	Double C2-like domains, alpha.	0.570
LOC110949433	LOC110968316	ENSAPOP00000003622	ENSAPOP00000002332	Uncharacterized protein.	RAB3C, member RAS oncogene family.	0.698
LOC110949433	LOC110970237	ENSAPOP00000003622	ENSAPOP00000021392	Uncharacterized protein.	RAB3B, member RAS oncogene family.	0.698
LOC110952740	ENSAPOP00000009549	ENSAPOP00000009562	ENSAPOP00000009549	RAB3D, member RAS oncogene family, b.	Uncharacterized protein.	0.456
LOC110952740	LOC110949433	ENSAPOP00000009562	ENSAPOP00000003622	RAB3D, member RAS oncogene family, b.	Uncharacterized protein.	0.698
LOC110952740	LOC110957159	ENSAPOP00000009562	ENSAPOP00000032554	RAB3D, member RAS oncogene family, b.	RAB27B, member RAS oncogene family.	0.698
LOC110952740	LOC110968261	ENSAPOP00000009562	ENSAPOP00000004141	RAB3D, member RAS oncogene family, b.	Double C2-like domains, alpha.	0.456
LOC110952740	rab27a	ENSAPOP00000009562	ENSAPOP00000033687	RAB3D, member RAS oncogene family, b.	RAB27A, member RAS oncogene family.	0.698
LOC110957159	ENSAPOP00000009549	ENSAPOP00000032554	ENSAPOP00000009549	RAB27B, member RAS oncogene family.	Uncharacterized protein.	0.570