Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctnnal1Catenin (cadherin-associated protein), alpha-like 1. (710 aa)    
Predicted Functional Partners:
afdn
Afadin, adherens junction formation factor a.
   
 0.898
tln2
Talin 2b.
   
 0.761
LOC110961362
Talin 2a.
   
 0.761
tlnrd1
Talin rod domain containing 1.
   
 0.761
LOC110963287
Talin 1.
   
 0.761
SH3RF3
SH3 domain containing ring finger 3.
    
 0.689
ENSAPOP00000002467
Uncharacterized protein.
   
 
 0.683
ENSAPOP00000015168
Syntrophin, gamma 1.
   
 
 0.683
sntg2
Syntrophin, gamma 2.
   
 
 0.683
pikfyve
Phosphoinositide kinase, FYVE finger containing.
     
  0.652
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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