Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LTBP3Latent transforming growth factor beta binding protein 3. (1242 aa)    
Predicted Functional Partners:
LOC110957931
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.971
LOC110952377
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.867
tgfb3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.867
LOC110966149
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.832
tgfb2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.832
LOC110969814
Thrombospondin 1b.
   
 
 0.793
LOC110963503
Thrombospondin 1a.
   
 
 0.793
thbs2
Thrombospondin 2a.
   
 
 0.793
mef2c
Myocyte enhancer factor 2cb.
    
 
 0.682
NCSTN
Nicastrin.
    
 0.657
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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