Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110945297Actinodin3. (273 aa)    
Predicted Functional Partners:
cdk12
Cyclin-dependent kinase 12.
    
 
 0.545
cdk13
Cyclin-dependent kinase 13.
    
 
 0.545
ENSAPOP00000004084
HECT domain-containing protein.
    
  0.478
KMT2A
Lysine methyltransferase 2A.
    
  0.478
LOC110971355
PHD-type domain-containing protein.
    
  0.478
ENSAPOP00000012645
Uncharacterized protein.
    
  0.478
rbbp5
Retinoblastoma binding protein 5.
    
 0.478
ENSAPOP00000014597
HECT domain-containing protein.
    
  0.478
ENSAPOP00000014761
Uncharacterized protein.
    
  0.478
rai1
Retinoic acid induced 1.
    
  0.478
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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