Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000004205Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
krit1
KRIT1 ankyrin repeat containing.
    
 0.703
ENSAPOP00000014752
ZP domain-containing protein.
   
 0.599
LOC110956552
ZP domain-containing protein.
   
 0.599
LOC110966162
Uncharacterized protein.
    
 0.593
pdcd10
Programmed cell death 10b.
    
 0.593
PRPH
Peripherin; Belongs to the intermediate filament family.
   
  0.555
frmd8
FERM domain containing 8.
    
  0.551
ENSAPOP00000019165
Fras1 related extracellular matrix 1b.
    
 0.541
frem1
Fras1 related extracellular matrix 1a.
    
 0.541
ENSAPOP00000009286
Uncharacterized protein.
   
 0.535
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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