Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cacnb1Calcium channel, voltage-dependent, beta 1 subunit. (625 aa)    
Predicted Functional Partners:
cacna2d1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 0.921
LOC110948569
Calcium channel, voltage-dependent, alpha 2/delta subunit 1a.
   
 0.921
LOC110955267
Calcium channel, voltage-dependent, alpha 2/delta subunit 2b.
   
 0.905
cacna2d2
Calcium channel, voltage-dependent, alpha 2/delta subunit 2a.
   
 0.905
camk2b
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
   
 0.888
LOC110964357
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
   
 0.888
LOC110955502
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
    
  0.885
LOC110964154
Serine/threonine-protein phosphatase.
    
  0.885
ppp2r5d
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
    
  0.885
LOC110966887
Serine/threonine-protein phosphatase.
    
  0.885
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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