Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem62Transmembrane protein 62. (659 aa)    
Predicted Functional Partners:
ccndbp1
Cyclin D-type binding-protein 1.
    
 
 0.724
thoc6
THO complex 6.
      
 0.659
ENSAPOP00000015417
Uncharacterized protein.
      
 0.655
NCSTN
Nicastrin.
    
 0.622
LOC110957931
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.603
LOC110965232
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.598
LOC110967531
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.598
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.591
LOC110961546
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.591
LOC110954674
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.591
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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