STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lin54Lin-54 DREAM MuvB core complex component. (812 aa)    
Predicted Functional Partners:
lin9
Lin-9 DREAM MuvB core complex component.
   
 0.999
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.998
lin37
Lin-37 DREAM MuvB core complex component.
    
 0.994
rbbp4
WD_REPEATS_REGION domain-containing protein.
   
 0.980
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.980
mybl2
V-myb avian myeloblastosis viral oncogene homolog-like 2b.
    
 0.978
LOC110968098
WD_REPEATS_REGION domain-containing protein.
   
 0.970
LOC110945738
CAF1C_H4-bd domain-containing protein.
   
 0.970
LOC110956771
Uncharacterized protein.
    
 0.963
tfdp1
Transcription factor.
   
 0.952
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.