Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110957500Copine Va. (573 aa)    
Predicted Functional Partners:
rnaseh2b
Ribonuclease H2, subunit B.
   
 
 0.589
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.573
sergef
Secretion regulating guanine nucleotide exchange factor.
   
  
 0.548
LOC110952428
Myocardin related transcription factor Aa.
     
 0.540
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.534
LOC110954021
Fin bud initiation factor b.
      
 0.532
LOC110956643
Acetylserotonin O-methyltransferase 2.
     
 0.524
asmt
Acetylserotonin O-methyltransferase.
     
 0.524
ucma
Upper zone of growth plate and cartilage matrix associated b.
      
 0.524
inpp5f
Inositol polyphosphate-5-phosphatase F.
     
  0.511
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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