Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110958079Protein phosphatase, Mg2+/Mn2+ dependent, 1J. (501 aa)    
Predicted Functional Partners:
rab29
Uncharacterized protein.
    
 
 0.655
LOC110964874
Putative pyruvate dehydrogenase phosphatase isoenzyme 2.
      
 0.651
acbd3
Acyl-Coenzyme A binding domain containing 3.
    
 
 0.604
ppm1f
Protein phosphatase, Mg2+/Mn2+ dependent, 1F.
      
 0.603
rab35
RAB35, member RAS oncogene family b.
    
 
 0.529
LOC110955130
Si:dkey-16l2.16.
    
 
 0.529
rilpl2
Rab interacting lysosomal protein-like 2.
      
 0.509
tdp2
Tyrosyl-DNA phosphodiesterase 2b.
      
 0.503
dclre1a
DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae).
      
 0.425
dolpp1
Dolichyldiphosphatase 1.
      
 0.422
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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