STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110949902Uncharacterized protein. (834 aa)    
Predicted Functional Partners:
ddx10
RNA helicase.
    
 0.851
SUGP1
SURP and G-patch domain containing 1.
   
0.844
nol6
Nucleolar protein 6.
    
 
 0.811
utp6
UTP6 small subunit processome component.
    
 
 0.804
bysl
Bystin-like.
    
 
 0.798
rrp36
Ribosomal RNA processing 36.
   
   0.797
nom1
Nucleolar protein with MIF4G domain 1.
   
   0.796
ENSAPOP00000007743
Uncharacterized protein.
    
   0.795
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
    
   0.795
utp3
UTP3 small subunit processome component.
    
   0.795
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.