Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110960544Uncharacterized protein. (844 aa)    
Predicted Functional Partners:
LOC110961097
Ciliary neurotrophic factor receptor.
     
 0.874
LOC110949958
LIF receptor subunit alpha a.
     
  0.866
LOC110972263
Uncharacterized protein.
     
  0.866
LOC110951499
IL-6 subfamily cytokine M17.
     
  0.860
il6st
Uncharacterized protein.
     
  0.785
LOC110966260
Uncharacterized protein.
     
  0.785
LOC110961108
Uncharacterized protein.
     
  0.664
ebi3
Epstein-Barr virus induced 3.
     
  0.664
LOC110952469
Interleukin 6 receptor.
     
  0.664
maats1
MYCBP-associated, testis expressed 1.
      
 0.570
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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