STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000004408Uncharacterized protein. (122 aa)    
Predicted Functional Partners:
snapc3
Small nuclear RNA activating complex, polypeptide 3.
    
 0.999
snapc5
Small nuclear RNA activating complex, polypeptide 5.
    
 0.995
snapc1
Small nuclear RNA activating complex, polypeptide 1b.
    
 0.985
ENSAPOP00000016225
Uncharacterized protein.
    
 0.985
gtf2a2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.979
ENSAPOP00000011622
Uncharacterized protein.
    
 0.970
LOC110965789
General transcription factor IIA, 1.
    
  0.968
gtf2b
General transcription factor IIB.
    
 0.958
LOC110961851
General transcription factor IIA, 1-like.
    
  0.914
tbpl2
TATA box binding protein like 2.
    
 0.903
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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