Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000004408Uncharacterized protein. (122 aa)    
Predicted Functional Partners:
ENSAPOP00000011622
Uncharacterized protein.
    
 0.999
snapc3
Small nuclear RNA activating complex, polypeptide 3.
    
 0.999
snapc5
Small nuclear RNA activating complex, polypeptide 5.
    
 0.998
snapc1
Small nuclear RNA activating complex, polypeptide 1b.
    
 0.994
ENSAPOP00000016225
Uncharacterized protein.
    
 0.994
gtf2a2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
 0.972
bdp1
SANT domain-containing protein.
    
 0.966
LOC110965789
General transcription factor IIA, 1.
    
  0.956
brf2
BRF2 RNA polymerase III transcription initiation factor subunit.
   
  0.955
polr3e
Polymerase (RNA) III (DNA directed) polypeptide E.
    
 0.949
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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