Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110953466Sosondowah ankyrin repeat domain family member A. (465 aa)    
Predicted Functional Partners:
LOC110962917
Uncharacterized protein.
    
 0.698
traf7
TNF receptor-associated factor 7.
    
 0.658
aff4
AF4/FMR2 family, member 4.
    
 0.634
ENSAPOP00000024610
Uncharacterized protein.
    
  0.622
ENSAPOP00000028898
Uncharacterized protein.
    
  0.622
LOC110953481
Cyclin I family, member 2; Belongs to the cyclin family.
    
 0.608
ccni
Cyclin I; Belongs to the cyclin family.
    
 0.608
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
    
 0.598
LOC110961411
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
    
 0.598
corin
Corin, serine peptidase.
    
 0.581
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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