STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glod5Glyoxalase domain containing 5. (215 aa)    
Predicted Functional Partners:
taf1b
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
    
 0.871
suox
Sulfite oxidase.
  
  0.867
LOC110949866
Germ cell nuclear acidic peptidase.
    
 0.804
mcee
Methylmalonyl CoA epimerase.
  
  
 0.745
kars1
Lysine--tRNA ligase.
   
 0.707
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.691
hpdl
4-hydroxyphenylpyruvate dioxygenase.
     
 0.680
nme9
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.665
tbpl1
TBP-like 1.
   
 0.655
tbpl2
TATA box binding protein like 2.
   
 0.655
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.