Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mdga1MAM domain containing glycosylphosphatidylinositol anchor 1. (971 aa)    
Predicted Functional Partners:
rnpc3
RNA-binding region (RNP1, RRM) containing 3.
      
 0.710
LOC110957911
Uncharacterized protein; Belongs to the glycosyltransferase 47 family.
      
 0.647
EXT1
Exostosin glycosyltransferase 1; Belongs to the glycosyltransferase 47 family.
      
 0.647
wdr43
WD repeat domain 43.
      
 0.603
LOC110967034
Leucine rich repeat and fibronectin type III domain containing 5a.
   
 0.602
LOC110959904
Uncharacterized protein.
      
 0.594
LOC110968556
Eph receptor B2a.
    
 0.590
actr10
Actin related protein 10; Belongs to the actin family.
    
 
 0.577
LOC110962231
Neuroligin 2b.
    
 
 0.576
ENSAPOP00000005471
Protein kinase domain-containing protein.
    
  0.537
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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