STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dynlrb1Dynein light chain roadblock. (96 aa)    
Predicted Functional Partners:
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.983
LOC110964471
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 0.983
dynlt1
Dynein, light chain, Tctex-type 1.
  
 0.983
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.980
LOC110966849
Dynein, cytoplasmic 1, intermediate chain 2b.
   
 0.978
DYNLT3
Dynein, light chain, Tctex-type 3.
  
 0.977
LOC110957783
Uncharacterized protein.
  
 0.977
wdr60
WD repeat domain 60.
    
 0.972
DYNLL2
Dynein light chain.
   
 0.970
LOC110960543
Dynein light chain.
   
 0.970
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.