LOC110948146 protein (Acanthochromis polyacanthus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC110948146

Uncharacterized protein. (929 aa)

Predicted Functional Partners:

zbtb2

0.792

LOC110966381

0.786

LOC110953283

0.757

ENSAPOP00000024610

0.698

ENSAPOP00000028898

0.698

ush1c

0.678

sergef

0.678

LOC110953527

0.674

gatad2b

0.674

gatad2a

0.674

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000024610	ENSAPOP00000028898	ENSAPOP00000024610	ENSAPOP00000028898	Uncharacterized protein.	Uncharacterized protein.	0.943
ENSAPOP00000024610	LOC110948146	ENSAPOP00000024610	ENSAPOP00000004499	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSAPOP00000024610	LOC110953283	ENSAPOP00000024610	ENSAPOP00000011665	Uncharacterized protein.	LisH domain-containing protein.	0.496
ENSAPOP00000024610	zbtb2	ENSAPOP00000024610	ENSAPOP00000006690	Uncharacterized protein.	Zinc finger and BTB domain containing 2b.	0.698
ENSAPOP00000028898	ENSAPOP00000024610	ENSAPOP00000028898	ENSAPOP00000024610	Uncharacterized protein.	Uncharacterized protein.	0.943
ENSAPOP00000028898	LOC110948146	ENSAPOP00000028898	ENSAPOP00000004499	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSAPOP00000028898	LOC110953283	ENSAPOP00000028898	ENSAPOP00000011665	Uncharacterized protein.	LisH domain-containing protein.	0.496
ENSAPOP00000028898	zbtb2	ENSAPOP00000028898	ENSAPOP00000006690	Uncharacterized protein.	Zinc finger and BTB domain containing 2b.	0.698
LOC110948146	ENSAPOP00000024610	ENSAPOP00000004499	ENSAPOP00000024610	Uncharacterized protein.	Uncharacterized protein.	0.698
LOC110948146	ENSAPOP00000028898	ENSAPOP00000004499	ENSAPOP00000028898	Uncharacterized protein.	Uncharacterized protein.	0.698
LOC110948146	LOC110953283	ENSAPOP00000004499	ENSAPOP00000011665	Uncharacterized protein.	LisH domain-containing protein.	0.757
LOC110948146	LOC110953527	ENSAPOP00000004499	ENSAPOP00000003084	Uncharacterized protein.	GATA zinc finger domain containing 2A.	0.674
LOC110948146	LOC110966381	ENSAPOP00000004499	ENSAPOP00000006093	Uncharacterized protein.	POU domain protein.	0.786
LOC110948146	gatad2a	ENSAPOP00000004499	ENSAPOP00000022449	Uncharacterized protein.	GATA zinc finger domain containing 2Ab.	0.674
LOC110948146	gatad2b	ENSAPOP00000004499	ENSAPOP00000004229	Uncharacterized protein.	GATA zinc finger domain containing 2B.	0.674
LOC110948146	sergef	ENSAPOP00000004499	ENSAPOP00000028528	Uncharacterized protein.	Secretion regulating guanine nucleotide exchange factor.	0.678
LOC110948146	ush1c	ENSAPOP00000004499	ENSAPOP00000017986	Uncharacterized protein.	Usher syndrome 1C.	0.678
LOC110948146	zbtb2	ENSAPOP00000004499	ENSAPOP00000006690	Uncharacterized protein.	Zinc finger and BTB domain containing 2b.	0.792
LOC110953283	ENSAPOP00000024610	ENSAPOP00000011665	ENSAPOP00000024610	LisH domain-containing protein.	Uncharacterized protein.	0.496
LOC110953283	ENSAPOP00000028898	ENSAPOP00000011665	ENSAPOP00000028898	LisH domain-containing protein.	Uncharacterized protein.	0.496