Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970074BCL2 interacting protein like. (356 aa)    
Predicted Functional Partners:
gfer
Sulfhydryl oxidase.
    
 
 0.880
ctu2
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with CTU1/ATPBD3 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
      
 0.689
klhl8
Kelch-like family member 8.
      
 0.684
LOC110952821
Decapping mRNA 1B.
      
 0.671
narf
Nuclear prelamin A recognition factor; Belongs to the NARF family.
      
 0.660
scnm1
Sodium channel modifier 1.
      
 0.605
morn5
MORN repeat containing 5.
      
 0.593
flii
FLII actin remodeling protein.
      
 0.578
VCPIP1
Valosin containing protein interacting protein 1.
      
 0.533
vcpip1
Valosin containing protein (p97)/p47 complex interacting protein 1.
      
 0.533
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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