Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110959985Heme binding protein 2. (237 aa)    
Predicted Functional Partners:
pef1
Penta-EF-hand domain containing 1.
    
   0.792
pdcd6
Programmed cell death 6.
    
   0.792
lrpprc
Leucine-rich pentatricopeptide repeat containing.
    
 
 0.661
LOC110952874
Inhibitor of DNA binding 3.
   
    0.585
LOC110957217
CECR2 histone acetyl-lysine reader.
      
 0.551
uxt
Ubiquitously-expressed, prefoldin-like chaperone.
      
 0.517
ENSAPOP00000022533
Coiled-coil domain containing 28A.
   
  
 0.477
zfyve21
Zinc finger, FYVE domain containing 21.
      
 0.421
pinx1
PIN2 (TERF1) interacting telomerase inhibitor 1.
      
 0.415
trim45
Tripartite motif containing 45.
      
 0.405
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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