STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmp24Matrix metallopeptidase 24. (548 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.816
LOC110962342
TIMP metallopeptidase inhibitor 2b.
    
 0.796
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.796
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 1.
    
 0.698
LOC110952174
Heparin-binding EGF-like growth factor a.
    
 0.655
cd44
CD44 molecule (Indian blood group) b.
   
 0.589
MMP1
Matrix metallopeptidase 1.
  
 
0.587
ENSAPOP00000014235
Matrix metallopeptidase 20b (enamelysin).
  
 
0.586
LOC110954896
Matrix metallopeptidase 13b.
  
 
0.586
mmp2
Matrix metallopeptidase 2.
  
 
0.584
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.