Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110951202Uncharacterized protein. (520 aa)    
Predicted Functional Partners:
msi2
Musashi RNA-binding protein 2a.
    
 
 0.632
LOC110953071
Uncharacterized protein.
    
 
 0.632
MSI1
Musashi RNA binding protein 1.
    
 
 0.632
ENSAPOP00000025635
Uncharacterized protein; Belongs to the BolA/IbaG family.
      
 0.625
LOC110959966
Heterogeneous nuclear ribonucleoprotein K, like.
    
 
 0.619
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
    
 
 0.619
letmd1
LETM1 domain containing 1.
      
 0.566
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 
 0.542
dazap1
DAZ associated protein 1.
    
 
 0.515
adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.494
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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