Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110965291COP9 constitutive photomorphogenic homolog subunit 7A. (254 aa)    
Predicted Functional Partners:
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
 0.991
COPS6
COP9 signalosome subunit 6.
   
 0.990
gps1
G protein pathway suppressor 1.
   
 0.989
cops8
COP9 signalosome subunit 8.
    
 0.989
cops3
COP9 signalosome subunit 3.
    
 0.989
cops2
COP9 signalosome subunit 2.
    
 0.985
cops5
COP9 signalosome subunit 5.
   
 0.964
ddb2
Damage-specific DNA binding protein 2.
    
 0.952
ENSAPOP00000018513
Uncharacterized protein.
   
 0.946
ENSAPOP00000031845
annotation not available
   
 0.946
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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