Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
inavaInnate immunity activator a. (582 aa)    
Predicted Functional Partners:
sgf29
SAGA complex associated factor 29.
    
   0.734
tax1bp3
Tax1 (human T-cell leukemia virus type I) binding protein 3.
    
   0.725
sav1
Salvador family WW domain containing protein 1.
    
 0.718
LOC110964183
Dynactin 1a.
    
  0.698
LOC110967265
Dynactin 1b.
    
  0.698
dctn5
Dynactin 5.
    
   0.639
cyth3
Cytohesin 3.
    
 
 0.634
LOC110962345
Cytohesin 1a.
    
 
 0.634
LOC110959703
Uncharacterized protein.
    
 
 0.634
LOC110948391
Cytohesin 1b.
    
 
 0.634
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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