STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110951197Forkhead box A3. (467 aa)    
Predicted Functional Partners:
LOC110947951
GATA binding protein 1a.
  
 0.745
gata6
GATA binding protein 6.
   
 0.711
hnf1a
HNF1 homeobox a.
   
 
 0.682
gata4
GATA binding protein 4.
   
 0.670
gata5
GATA binding protein 5.
   
 0.670
nrip1
Nuclear receptor interacting protein 1b.
     
 0.663
ENSAPOP00000013861
Trichorhinophalangeal syndrome I.
    
 0.656
LOC110955291
GATA binding protein 2a.
    
 0.639
GATA2
GATA binding protein 2.
    
 0.639
gata3
GATA binding protein 3.
    
 0.639
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (40%) [HD]