Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ankra2Ankyrin repeat, family A (RFXANK-like), 2. (348 aa)    
Predicted Functional Partners:
rfxap
Regulatory factor X-associated protein.
    
 0.974
ENSAPOP00000008590
Uncharacterized protein.
    
 0.926
rfx5
Regulatory factor X, 5.
    
 0.912
RFX7
Regulatory factor X7.
    
 
 0.908
HDAC3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.799
LOC110959074
Transmembrane protein 59-like.
   
 0.719
mrps26
Mitochondrial ribosomal protein S26.
   
  
 0.679
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
      
 0.670
LOC110950353
Regulatory factor X7b.
   
 0.669
lrp2
Low density lipoprotein receptor-related protein 2a.
    
 
 0.666
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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