STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000004648Single-pass membrane protein with aspartate-rich tail 1a. (46 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
    
 0.984
micu2
Mitochondrial calcium uptake 2.
    
 0.976
LOC110947956
MCU domain-containing protein.
    
 0.938
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.938
mcu
Mitochondrial calcium uniporter.
    
 0.938
edf1
Endothelial differentiation-related factor 1.
   
    0.817
LOC110965540
Mitochondrial calcium uptake family, member 3a.
     
 0.774
LOC110962665
Mitochondrial calcium uptake family, member 3b.
     
 0.774
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.742
LOC110959663
Si:ch1073-174d20.2.
     
 0.736
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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