Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sorcs2Uncharacterized protein. (141 aa)    
Predicted Functional Partners:
LOC110958699
Sortilin.
    
 0.803
LOC110958259
Sortilin.
    
 0.803
LOC110952577
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.790
ENSAPOP00000030916
Sortilin.
    
 0.751
LOC110949617
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
    
 
 0.695
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.686
gak
Cyclin G associated kinase.
     
 0.624
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.610
LOC110961798
Sortilin-related VPS10 domain containing receptor 2.
 
      0.495
igf2r
Insulin-like growth factor 2 receptor.
    
 0.494
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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