Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdr45bWD repeat domain 45B. (344 aa)    
Predicted Functional Partners:
atg2a
Autophagy related 2A.
    
 0.969
ATG2B
Autophagy related 2B.
    
 0.968
wipi2
WD repeat domain, phosphoinositide interacting 2.
   
 0.912
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.912
LOC110962183
WD repeat domain, phosphoinositide interacting 1.
   
 0.907
atg16l1
ATG16 autophagy related 16-like 1 (S. cerevisiae).
     
 0.900
LOC110968049
WD_REPEATS_REGION domain-containing protein.
     
 0.900
ENSAPOP00000007363
Uncharacterized protein.
     
  0.842
wdr45
WD repeat domain 45.
     
  0.842
LOC110947042
Uncharacterized protein.
     
  0.842
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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