Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110949408Uncharacterized protein. (1184 aa)    
Predicted Functional Partners:
LOC110966009
Unc-5 netrin receptor C.
      
 0.678
LOC110966092
Uncharacterized protein.
      
 0.675
glt1d1
Glycosyltransferase 1 domain containing 1.
      
 0.655
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
   
 
  0.588
LOC110958389
Fam20C domain-containing protein.
     
  0.564
LOC110958289
FAM20C golgi associated secretory pathway kinase a.
     
  0.564
fam20b
FAM20B glycosaminoglycan xylosylkinase.
   
 
  0.497
LOC110952424
Fam20C domain-containing protein.
     
  0.456
LOC110965097
Family with sequence similarity 20 member C, like.
     
  0.456
LOC110970754
Sterile alpha motif domain containing 7.
   
 
  0.448
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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