Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110954484RAS-like, family 10, member A. (203 aa)    
Predicted Functional Partners:
LOC110955386
Si:dkey-191g9.5.
    
  0.844
RAP1GDS1
Rap1 GTPase-GDP dissociation stimulator 1.
    
  0.844
LOC110968772
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
  0.779
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.750
LOC110946495
Uncharacterized protein.
    
   0.748
LOC110955806
Uncharacterized protein.
    
   0.748
LOC110956405
Uncharacterized protein.
    
   0.748
LOC110958770
PID domain-containing protein.
    
 0.746
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.746
LOC110969350
Si:dkey-34e4.1.
    
 0.746
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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