Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110953464Calcium binding and coiled-coil domain 1b. (526 aa)    
Predicted Functional Partners:
LOC110970219
Malate synthase-like.
   
 
 0.850
nbr1
NBR1 autophagy cargo receptor a.
    
 0.841
LOC110967973
Aryl hydrocarbon receptor nuclear translocator.
    
   0.756
arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
    
   0.756
ENSAPOP00000011091
Uncharacterized protein.
    
  0.721
ENSAPOP00000028483
WDFY family member 4.
    
  0.721
tp53bp1
Tumor protein p53 binding protein, 1.
    
 0.689
crlf3
Cytokine receptor-like factor 3.
      
 0.661
phf5a
PHD finger protein 5A.
      
 0.646
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.645
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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