Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
msantd2Myb/SANT DNA binding domain containing 2. (556 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.775
luc7l3
LUC7-like 3 pre-mRNA splicing factor.
   
 
 0.695
rab30
RAB30, member RAS oncogene family.
      
 0.680
LOC110964394
RAN binding protein 2.
    
 0.679
ENSAPOP00000016008
PDZ domain-containing protein.
    
  0.670
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.670
ENSAPOP00000006159
Uncharacterized protein.
    
  0.627
rbbp5
Retinoblastoma binding protein 5.
    
 0.575
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.574
LOC110945283
Dual serine/threonine and tyrosine protein kinase.
    
 0.560
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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