STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948865Multiple EGF-like-domains 8. (207 aa)    
Predicted Functional Partners:
LOC110962946
Mical-like 2b.
    
 0.926
ENSAPOP00000034909
Calponin-homology (CH) domain-containing protein.
    
 0.926
RAB8A
RAB8A, member RAS oncogene family.
  
  
 
0.894
LOC110962953
Uncharacterized protein.
  
  
 
0.894
LOC110958627
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.871
LOC110948336
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.871
rab3ip
RAB3A interacting protein (rabin3).
    
 0.869
LOC110953754
RAB3A interacting protein (rabin3)-like 1.
    
 0.869
exoc4
Exocyst complex component 4.
    
 0.840
c9orf72
Zgc:100846.
    
 0.839
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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