Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
LOC110951191SERTA domain-containing protein. (346 aa)    
Predicted Functional Partners:
snrpb
Small nuclear ribonucleoprotein polypeptides B and B1.
    
   0.782
UBL5
Ubiquitin like 5.
    
   0.782
zc3h18
Zinc finger CCCH-type containing 18.
      
 0.577
mrps18a
Uncharacterized protein.
      
 0.530
sertad4
SERTA domain containing 4.
      
 0.513
rnls
Renalase, FAD-dependent amine oxidase.
      
 0.511
SERTAD2
SERTA domain containing 2b.
   
  
 0.506
RNF208
Ring finger protein 208.
      
 0.493
cunh11orf53
Si:ch211-213d14.1.
   
    0.492
LOC110960294
Transmembrane protein 86B.
   
    0.448
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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