Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
itga3Integrin, alpha 3b; Belongs to the integrin alpha chain family. (1075 aa)    
Predicted Functional Partners:
itgb4
Integrin beta.
   
 0.990
LOC110954669
Integrin beta; Belongs to the integrin beta chain family.
   
 0.986
LOC110951090
Integrin beta; Belongs to the integrin beta chain family.
   
 0.986
LOC110971452
Integrin beta.
   
 0.980
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.974
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.973
LOC110965159
Integrin beta; Belongs to the integrin beta chain family.
   
 0.967
LOC110959321
Integrin beta; Belongs to the integrin beta chain family.
   
 0.960
LOC110950824
Integrin beta; Belongs to the integrin beta chain family.
   
 0.960
ENSAPOP00000018138
Laminin N-terminal domain-containing protein.
   
 0.949
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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