STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setd4Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
suclg2
Succinate-CoA ligase, GDP-forming, beta subunit.
   
 0.924
ENSAPOP00000032490
ATP-grasp_2 domain-containing protein.
   
 0.869
suclg1
Succinate-CoA ligase, alpha subunit.
   
 
 0.845
cs
Citrate synthase; Belongs to the citrate synthase family.
    
 0.831
ENSAPOP00000026781
Ldh_1_N domain-containing protein.
     
 0.823
LOC110949568
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 0.789
ACLY
ATP citrate lyase.
   
 0.789
mindy2
MINDY lysine 48 deubiquitinase 2.
    
 0.766
mmaa
Metabolism of cobalamin associated A.
    
 0.766
mindy1
MINDY lysine 48 deubiquitinase 1.
    
 0.766
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.