Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam126aFamily with sequence similarity 126 member A. (501 aa)    
Predicted Functional Partners:
ttc7b
Tetratricopeptide repeat domain 7B.
    
 
 0.971
ttc7a
Tetratricopeptide repeat domain 7A.
    
 
 0.925
shpk
Sedoheptulokinase.
    
   0.859
ENSAPOP00000011549
Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.
    
 
 0.817
ENSAPOP00000011614
Uncharacterized protein.
    
 
 0.817
LOC110960528
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
    
 
 0.817
cunh2orf50
Si:dkey-18j18.3.
    
   0.768
ppp3r1
Uncharacterized protein.
    
 
 0.739
LOC110965400
Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.
    
 
 0.739
ENSAPOP00000023549
Uncharacterized protein.
    
 
 0.731
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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