STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000004933Thyroglobulin type-1 domain-containing protein. (74 aa)    
Predicted Functional Partners:
hspg2
Heparan sulfate proteoglycan 2.
   
 0.881
LOC110970219
Malate synthase-like.
  
 
  0.816
ENSAPOP00000018168
Uncharacterized protein.
    
 0.805
LOC110970024
Cytochrome b5 reductase 4.
    
 0.805
agrn
Agrin.
   
 0.775
LAMA2
Laminin subunit alpha 2.
   
 0.744
LOC110963955
Uncharacterized protein.
   
 0.738
ENSAPOP00000000347
Uncharacterized protein.
   
 0.708
lamc1
Laminin, gamma 1.
   
 0.708
ENSAPOP00000023079
Laminin N-terminal domain-containing protein.
   
 0.708
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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