STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110961362Talin 2a. (2542 aa)    
Predicted Functional Partners:
LOC110958656
Vinculin a.
   
 0.975
ENSAPOP00000016299
Uncharacterized protein.
   
 0.963
vcl
Vinculin b.
   
 0.963
itgb8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.920
itgb4
Integrin beta.
   
 0.920
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.919
CAPN2
Calpain 2; Belongs to the peptidase C2 family.
    
 0.912
LOC110950015
Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family.
    
 0.912
LOC110965159
Integrin beta; Belongs to the integrin beta chain family.
   
 0.910
LOC110954669
Integrin beta; Belongs to the integrin beta chain family.
   
 0.900
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.