Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plekPleckstrin. (351 aa)    
Predicted Functional Partners:
rabif
RAB interacting factor.
      
 0.680
actl6a
Actin-like 6A; Belongs to the actin family.
     
 0.651
inppl1
Inositol polyphosphate phosphatase-like 1a.
   
 
 0.620
LOC110951709
Inositol polyphosphate phosphatase-like 1b.
   
 
 0.620
LOC110950621
Moesin a.
    
 
 0.612
CDC42
Cell division cycle 42.
   
 
 0.575
LOC110951271
Cell division cycle 42.
   
 
 0.575
manf
Mesencephalic astrocyte-derived neurotrophic factor.
     
 0.569
LOC110950857
HABP4_PAI-RBP1 domain-containing protein.
     
  0.564
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
      
 0.536
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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