Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dedd2Death effector domain-containing 1. (376 aa)    
Predicted Functional Partners:
LOC110952568
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 
 0.794
cmss1
Cms1 ribosomal small subunit homolog.
      
 0.678
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
      
 0.628
fam133b
Uncharacterized protein.
      
 0.615
cunh3orf70
Zgc:162707.
      
 0.615
atg16l1
ATG16 autophagy related 16-like 1 (S. cerevisiae).
    
   0.605
LOC110968049
WD_REPEATS_REGION domain-containing protein.
    
   0.605
maco1
Macoilin 1b.
      
 0.587
LOC110961303
Macoilin 1a.
      
 0.587
pafah1b3
Platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit.
      
 0.579
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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