Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
emid1EMI domain-containing protein. (493 aa)    
Predicted Functional Partners:
ENSAPOP00000024610
Uncharacterized protein.
    
  0.735
ENSAPOP00000028898
Uncharacterized protein.
    
  0.735
pofut2
Protein O-fucosyltransferase 2.
     
 0.716
serpinh1
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family.
    
 0.696
LOC110952863
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family.
    
 0.696
mrpl45
Mitochondrial ribosomal protein L45.
      
 0.679
trappc2
Trafficking protein particle complex 2.
     
 0.677
nup43
Nucleoporin 43.
     
 0.659
pla2g4a
Phospholipase A2.
     
  0.607
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
      
 0.604
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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