STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
odc1Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (431 aa)    
Predicted Functional Partners:
ENSAPOP00000026931
Ornithine decarboxylase antizyme 2a.
    
 0.989
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.988
LOC110966160
Ornithine decarboxylase antizyme 1b.
    
 0.977
oaz1
Ornithine decarboxylase antizyme 1a.
    
 0.977
sms
Spermine synthase.
  
 0.966
oat
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.960
LOC110970320
N-acetyltransferase domain-containing protein.
    
 0.953
sat1
Spermidine/spermine N1-acetyltransferase 1.
    
 0.953
LOC110963422
Arginase.
  
 
 0.946
arg2
Arginase.
  
 
 0.946
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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