STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110961666Si:ch211-131k2.3. (158 aa)    
Predicted Functional Partners:
ppp5c
Serine/threonine-protein phosphatase.
    
 0.960
ptges2
Prostaglandin E synthase 2-like; Belongs to the GST superfamily.
     
 0.946
aars2
Alanyl-tRNA synthetase 2, mitochondrial (putative); Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
   
 
 0.943
aars1
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
   
 
 0.943
LOC110969591
TSC complex subunit 1b.
  
 0.918
ENSAPOP00000006536
Uncharacterized protein.
  
 0.918
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
  
 0.918
LOC110971164
Uncharacterized protein.
  
 0.918
trap1
TNF receptor-associated protein 1.
  
 0.918
LOC110955499
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
  
 0.918
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.