Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kcmf1Potassium channel modulatory factor 1. (389 aa)    
Predicted Functional Partners:
abhd10
Transgelin 3b.
    
   0.875
ENSAPOP00000007723
UBR-type domain-containing protein.
    
 
 0.826
ENSAPOP00000015567
UBR-type domain-containing protein.
    
 
 0.826
ENSAPOP00000015579
Uncharacterized protein.
    
 
 0.826
ENSAPOP00000015644
Uncharacterized protein.
    
 
 0.826
ENSAPOP00000026327
annotation not available
    
 
 0.826
sars2
Seryl-tRNA synthetase 2, mitochondrial.
    
   0.825
pir
Pirin; Belongs to the pirin family.
    
   0.638
vegfd
Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.
    
   0.638
ube2a
Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.630
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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